CWL files for automatic UC2 pipeline execution

This repository contains a set of CWL files defining workflows allowing to run UC2 in an automated fashion.

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12 commits | Last update: October 22, 2020

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What CWL files for automatic UC2 pipeline execution can do for you

  • workflow definitions for LTA pipelines
  • based on the CWL standard
  • pipelines for the IEE and Xenon backends

This repository contains a set of processing pipeline descriptions in the Common Workflow Language (CWL) format. These define the processing pipelines needed to run the UC2 analysis workflows in an automated fashion. The CWL workflow definitions contain steps corresponding to the actual LTA data reduction pipeline steps, plus some extra steps needed to create the appropriate directory structure and adapt the configuration files to the context and the selected data.

The files are split into two sets, each corresponding to a way of running UC2 relatively to whether the tool actually controlling the CWL tasks (cwl-runner) is running inside or outside the container

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Tags
  • Astronomy
  • Workflow technologies
Programming Language
  • Shell scripts
License
  • Apache-2.0
Source code

Participating organizations

Contributors

  • Souley Madouguo
    Netherlands eScience Center
  • Gijs Molenaer
    Pythonic.nl
  • Michael R. Crusoe
    Common Workflow Language
Contact person
Souley Madouguo
Netherlands eScience Center

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